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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908331.1_cds_XP_016458434.1_52063
CDS Infomation

[gene=LOC107782108] [db_xref=GeneID:107782108] [protein=putative 3,4-dihydroxy-2-butanone kinase isoform X3] [protein_id=XP_016458434.1] [location=join(113315..113377,113466..113513,113744..113815,113975..114064,115048..115221,115609..115692,116478..116533,118307..118437,118507..118599,118913..118977,119315..119458,119545..119588,120348..120431,120528..120601,120686..120798,120884..120979,123147..123272)] [gbkey=CDS]
Sequence

ATGCTGACTGCAGCCATCTGTGGGGACGTTTTTACCTCTCCAAATGTTGACTCAATTGTT
GCTGGCATACGAGCTGTCACAGGTCCCATGGGGTGCCTTCTGATTGTCAAGAACTATACT
GGTGATCGATTGAATTTTGGTTTGGCTGCTGAACAAGCTAAATCTGAAGGTTACAAAGTA
GAGATGGTAATTGTTGGTGATGACTGTGCTTTACCACCTCCAAGAGGCATTGCTGGCCGA
AGAGGTTTGGCAGGGACGATTCTTGTTCACAAGGTTGCTGGAGCTGCAGCAGCTTGTGGT
CTTCCTCTTGCTGACGTTGCAGCTGAAGCAAAACGTGCATCAGAAATGGTTGGGACAATG
GGTGTTGCATTATCTGTTTGCACATTGCCAGGACAGGTGACGTCAGACCGTTTAGGCCCA
GGAAAGATGGAGCTTGGTCTTGGAATACACGGGGAACCAGGAGCTGCTGTAGCTTACCTA
CAACCAGTAGATGTGGTGGTTTCACATGTTTTGAAGGAGATTTTGTCATCGGAGACTAAC
TACGTTCCAATCACACGTGGAAGTAGAGTTGTGCTCCTCATAAATGGATTAGGAGCAACA
CCATTGATGGAATTGATGATTATAGCTGGCAAGGCTGTCCCAGGATTGCAGCTTGAACAT
GGTCTAGCTGTTGATAGAGTCTATACAGGATCACTTATGACTTCACTTGATATGGCAGGA
TTTTCAATTTCTGTAATGAAGGCTGATCAAGCAATTTTAGACCGTTTAGATGCTCCCACT
AAAGCTCCAAATTGGCCTGTTGGTGCTGACGGTAACCGACCTCCTGCAAAGATACCTGTT
CCGCTTCCTCCACCACATTCTATCCAGAGTGACAAGACATTGAGTCGGCCTGAAAAACTG
ATCTCTCTGGGTCATATCCTTGAGGCAGCTATTGAAGCTGCAGCAACTGAACTTGTAAAT
CTCAGGGATAATTTGAATGAGTGGGATAGCAAAGTTGGTGATGGTGATTGTGGTTCAACT
ATGTTCAGAGGTGCAGTGGCTATACTTGAAGACATGAAGAAGTACTATCCGTTGAATGAC
CCTGCAGAAACAGTCAATGAAATTGGATCTTCTATTAGAAGAGTAATGGGGGGAACAAGC
GGTATCTTATATGATATATTCTGTAAGGCAGCATATGCAAAGTTGAAAGCAGATTCCGAG
TTGGTTATCACAGCTCTGCACTGGGCTGATGCACTTGAAGCTGCTATCGCTGCTGTTAGT
AAATATGGAGGAGCTCGTGCTGGTTATCGCACACTTTTAGATGCTCTTATTCCAGCATTG
TCTGCTCTTAAAGAGAGGTTGAGTGCTGGGGACAACCCTGTGGATGCTTTCGTTATTTCT
GCTGAGGCAGCAGTTGCTGGAGCCGAGTCAACCAAGCACATGCAAGCGCAGGCTGGCCGT
TCAACCTACATACCTGGAGATGTTCTTGCTTCAATTCCTGACCCTGGTGCCATGGCTGCA
GCTGCGTGGTACAGAGCTGCTGCTTTAGCTATAAAGGAGAAGTGTAGTACAGCATAA

Peptide Sequence

PEP ID

XP_016458434.1
PEP Infomation

PREDICTED: putative 3,4-dihydroxy-2-butanone kinase isoform X3 [Nicotiana tabacum]
Sequence

MLTAAICGDVFTSPNVDSIVAGIRAVTGPMGCLLIVKNYTGDRLNFGLAAEQAKSEGYKV
EMVIVGDDCALPPPRGIAGRRGLAGTILVHKVAGAAAACGLPLADVAAEAKRASEMVGTM
GVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVAYLQPVDVVVSHVLKEILSSETN
YVPITRGSRVVLLINGLGATPLMELMIIAGKAVPGLQLEHGLAVDRVYTGSLMTSLDMAG
FSISVMKADQAILDRLDAPTKAPNWPVGADGNRPPAKIPVPLPPPHSIQSDKTLSRPEKL
ISLGHILEAAIEAAATELVNLRDNLNEWDSKVGDGDCGSTMFRGAVAILEDMKKYYPLND
PAETVNEIGSSIRRVMGGTSGILYDIFCKAAYAKLKADSELVITALHWADALEAAIAAVS
KYGGARAGYRTLLDALIPALSALKERLSAGDNPVDAFVISAEAAVAGAESTKHMQAQAGR
STYIPGDVLASIPDPGAMAAAAWYRAAALAIKEKCSTA

Transcript Sequence

Gene sequence data has not been registered.